Bad Grammar, Good Syntax

British geneticist interested in splicing, RNA decay, and synthetic biology. This is my blog focusing on my adventures in computational biology.

Jan 20
Jan 20 CompBio 029: It is January 2025 and AI hallucinations of academic references is still a huge problem

Dec 17
Dec 17 CompBio 028: Python vs R: an endless war

Dec 18
Dec 18 CompBio 027: Is AI generated code here to replace computational biologists?

Dec 12
Dec 12 Compbio 026: Using the terminal at Warp speed

Sep 30
Sep 30 Compbio 025: Git for digital noobs (and why version control matters)

Sep 28
Sep 28 Compbio 024: A Bioinformagician

Aug 2
Aug 2 Compbio 023: Use screen to prevent compute server disconnect

Jan 2
Jan 2 Compbio 022: Differential splicing and transcripts - Not as simple as it first appears

Apr 2
Apr 2 Compbio 021: UpSetting the status quo - UpSets replace complex Venn diagrams

Mar 5
Mar 5 Compbio 020: Reads, fragments and inserts - what you need to know for understanding your sequencing data

Jan 20
Jan 20 Compbio 019: Getting the most out of your data on the command line

Jan 9
Jan 9 Compbio 018: Getting more significance out of R

Dec 21
Dec 21 Compbio 017: Is your overlap significant?

Dec 18
Dec 18 Compbio 016: Practical Python for biologists - Moving from Python2 to Python3

Dec 11
Dec 11 Compbio 015: Practical Python for biologists - Processing two input files

Dec 4
Dec 4 Compbio 014: Practical Python for biologists - Finding motifs with Python

Nov 27
Nov 27 Compbio 013: Practical Python for Biologists - Opening and saving files

Nov 20
Nov 20 Compbio 012: Making Venn diagrams the right way (using Python)

Nov 13
Nov 13 Compbio 011: The fantastic Jupyter (IPython) notebook

Nov 6
Nov 6 Compbio 010: Ubuntu on Windows